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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9295761 chr6:28147987 A/G BTN3A2 chr6:26365387-26378548:+ -0.31 -6.4 3.6E-10 Box Plot
THCA rs9295762 chr6:28155418 C/T BTN3A2 chr6:26365387-26378548:+ 0.31 6.83 2.61E-11 Box Plot
THCA rs9295768 chr6:28209102 G/A BTN3A2 chr6:26365387-26378548:+ -0.4 -8.39 5.34E-16 Box Plot
THCA rs9296865 chr6:57199709 A/G GUSBL2 chr6:58246159-58287724:- -0.33 -6.17 1.47E-9 Box Plot
THCA rs9299258 chr9:100666543 T/G FAM81A chr15:59664892-59815748:+ -0.26 -6.02 3.39E-9 Box Plot
THCA rs9301483 chr13:111530373 A/G NEK4 chr3:52742465-52804965:- 0.2 6.19 1.27E-9 Box Plot
THCA rs9306387 chr22:23979219 C/T IGLL3 chr22:25713888-25716191:+ -0.34 -6.15 1.63E-9 Box Plot
THCA rs9308836 chr2:101146482 G/T LOC285359 chr3:101431278-101432259:+ 0.35 7.83 3.15E-14 Box Plot
THCA rs9313749 chr5:176597694 G/T LOC388955 chr2:63849182-63850159:- -0.68 -17.66 4.48E-54 Box Plot
THCA rs9313750 chr5:176601199 T/C LOC388955 chr2:63849182-63850159:- -0.69 -18.07 5.33E-56 Box Plot
THCA rs9313751 chr5:176644175 G/A LOC388955 chr2:63849182-63850159:- -0.76 -20.08 1.7E-65 Box Plot
THCA rs9314487 chr8:3274460 C/G CSMD1 chr8:2792875-4852494:- -0.51 -5.92 6.31E-9 Box Plot
THCA rs9314652 chr9:141052071 C/T TUBB4Q chr4:190903679-190906024:- -0.76 -14.4 2.57E-39 Box Plot
THCA rs9322996 chr14:39693018 T/G LOC647288 chr13:75811890-75814517:- 0.31 6.08 2.43E-9 Box Plot
THCA rs9322998 chr14:39781199 A/C LOC647288 chr13:75811890-75814517:- 0.6 12.95 4.37E-33 Box Plot